DESIGN OF HEPATITIS E VIRUS GENOTYPE 1 RECOMBINANT ORF3 PROTEIN BY CODON OPTIMIZATION METHOD
- Authors: Alatortseva G.I.1, Sidorov A.V.1, Nesterenko L.N.1, Luhverchik L.N.1, Zhukina M.V.1, Amiantova I.I.1, Milovanova A.V.1, Vorobev D.S.1, Ammur Y.I.1, Mikhailov M.I.2, Kyuregyan K.K.2, Kichatova V.S.2, Potemkin I.A.2, Isaeva O.V.2, Malinnikova E.Y.2, Karlsen A.A.2, Blinov V.M.1, Nurmatov Z.S.3, Nurmatov A.Z.3, Kasymov O.T.3, Zhavoronok S.V.4, Zverev V.V.1
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Affiliations:
- Mechnikov Research Institute of Vaccines and Sera
- Mechnikov Research Institute of Vaccines and Sera, Russian Medical Academy of Continuous Professional Education
- Scientific Production Association «Preventive Medicine»
- Belarusian State Medical University
- Issue: Vol 94, No 6 (2017)
- Pages: 63-72
- Section: Articles
- Submitted: 10.04.2019
- Published: 28.12.2017
- URL: https://microbiol.crie.ru/jour/article/view/232
- DOI: https://doi.org/10.36233/0372-9311-2017-6-63-72
- ID: 232
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About the authors
G. I. Alatortseva
Mechnikov Research Institute of Vaccines and Sera
Author for correspondence.
Email: noemail@neicon.ru
Россия
A. V. Sidorov
Mechnikov Research Institute of Vaccines and Sera
Email: noemail@neicon.ru
Россия
L. N. Nesterenko
Mechnikov Research Institute of Vaccines and Sera
Email: noemail@neicon.ru
Россия
L. N. Luhverchik
Mechnikov Research Institute of Vaccines and Sera
Email: noemail@neicon.ru
Россия
M. V. Zhukina
Mechnikov Research Institute of Vaccines and Sera
Email: noemail@neicon.ru
Россия
I. I. Amiantova
Mechnikov Research Institute of Vaccines and Sera
Email: noemail@neicon.ru
Россия
A. V. Milovanova
Mechnikov Research Institute of Vaccines and Sera
Email: noemail@neicon.ru
Россия
D. S. Vorobev
Mechnikov Research Institute of Vaccines and Sera
Email: noemail@neicon.ru
Россия
Yu. I. Ammur
Mechnikov Research Institute of Vaccines and Sera
Email: noemail@neicon.ru
Россия
M. I. Mikhailov
Mechnikov Research Institute of Vaccines and Sera, Russian Medical Academy of Continuous Professional Education
Email: noemail@neicon.ru
Россия
K. K. Kyuregyan
Mechnikov Research Institute of Vaccines and Sera, Russian Medical Academy of Continuous Professional Education
Email: noemail@neicon.ru
Россия
V. S. Kichatova
Mechnikov Research Institute of Vaccines and Sera, Russian Medical Academy of Continuous Professional Education
Email: noemail@neicon.ru
Россия
I. A. Potemkin
Mechnikov Research Institute of Vaccines and Sera, Russian Medical Academy of Continuous Professional Education
Email: noemail@neicon.ru
Россия
O. V. Isaeva
Mechnikov Research Institute of Vaccines and Sera, Russian Medical Academy of Continuous Professional Education
Email: noemail@neicon.ru
Россия
E. Yu. Malinnikova
Mechnikov Research Institute of Vaccines and Sera, Russian Medical Academy of Continuous Professional Education
Email: noemail@neicon.ru
Россия
A. A. Karlsen
Mechnikov Research Institute of Vaccines and Sera, Russian Medical Academy of Continuous Professional Education
Email: noemail@neicon.ru
Россия
V. M. Blinov
Mechnikov Research Institute of Vaccines and Sera
Email: noemail@neicon.ru
Россия
Z. Sh. Nurmatov
Scientific Production Association «Preventive Medicine»
Email: noemail@neicon.ru
Россия
A. Z. Nurmatov
Scientific Production Association «Preventive Medicine»
Email: noemail@neicon.ru
Россия
O. T. Kasymov
Scientific Production Association «Preventive Medicine»
Email: noemail@neicon.ru
Россия
S. V. Zhavoronok
Belarusian State Medical University
Email: noemail@neicon.ru
Россия
V. V. Zverev
Mechnikov Research Institute of Vaccines and Sera
Email: noemail@neicon.ru
Россия
References
- Алаторцев В.Е., Алаторцева Г.И. Патент РФ, 1992, № 2071501 на изобретение «Вектор pEL5a, предназначенный для экспрессии чужеродной ДНК».
- Алаторцев В.Е., Алаторцева Г.И. Патент РФ, 1992, № 2043409 на изобретение «Штамм бактерий Escherichia coli, используемый для получения рекомбинантных белков».
- Алаторцева Г.И. Получение рекомбинантных белков, содержащих антигенные детерминанты вируса гепатита Е, и создание на их основе диагностических тест-систем: Автореф. дисс. канд. биол. наук. М., 2000.
- Алаторцева Г.И., Сидоров А.В., Нестеренко J1.H. и др. Получение рекомбинантного аналога гликопротеина е вируса Varicella zoster: клонирование, экспрессия и исследование антигенных свойств. Эпидемиология и вакцинопрофилактика. 2016, 15, 1 (86): 77-85.
- Гловер Д. Новое в клонировании ДНК. Методы. М., 1989.
- Маниатис Т., Фрич Э., Сэмбрук Дж. Методы генетической инженерии. Молекулярное клонирование. М., Мир, 1984.
- Солонин С.А., Мальцева Н.С., Троценко О.Е. и др. Циркуляция вируса гепатита Е на территории Хабаровского края. Дальневосточный журнал инфекционной патологии. 2010, 16:31-36.
- Claudia P., Ravasi М.Е. et al. Expression of codon optimized genes in microbial systems: current industrial applications and perspectives. Front. Microbiol. 2014, 5: 2-8.
- Graff J., Torian U. et al. Abicistronic subgenomic mRNA encodes both the ORF2 and ORF3 proteins of hepatitis E virus. J. Virol. 2006, 80: 5919-5926.
- Hyams C., Mabayoje D.A., Copping R. et al. Serological cross reactivity to CMV and EBV causes problems in the diagnosis of acute hepatitis E virus infection. J. Med. Virol. 2014, 86 (3): 478-483.
- Khudyakov Y.E., Khudyakova N.S., Fields H.A. et al. Epitope mapping in proteins of hepatitis E virus. Virology. 1993, 194 (1): 89-96.
- Khudyakov Y.E., Khudyakova N.S., Jue D.L. et al. Comparative characterization of antigenic epitopes in the immunodominant region of the protein encoded by open reading frame 3 in burmese and mexican strains of hepatitis E virus. J. Gen. Virol. 1994, 75 (3): 641-646.
- Koonin E.V., Gorbalenya A.E., Purdy M.A. et al. Computer-assisted assignment of functional domains in the nonstructural polyprotein of hepatitis E virus: delineation of an additional group of positive-strand RNA plant and animal viruses. Proc. Natl. Acad. Sci. USA. 1992, 89 (17): 8259-8263.
- Kumar S., Tamura K., Nei M. MEG A3: Integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefings Bioinformatics. 2004, 5: 150-163.
- Kyte J., Doolittle R.F. A simple method for displaying the hydropathic character of a protein. J. Mol. Biol. 1983, 157 (1): 105-132.
- Ma H., SongX., Li Z. et al. Varying abilities of recombinant polypeptides from different regions of hepatitis E virus ORF2 and ORF3 to detect anti-HEV immunoglobulin M. J. Med. Virol. 2009,81 (6): 1052-1061.
- Nair V.P., Anang S., Subramani C. et al. Endoplastic reticulum stress induced synthesis of a novel viral factor mediates efficient replication of genotype-1 hepatitis E. PLoS Pathol. 2016, 12 (4): el005521.
- Obriadina A., Meng J.H., Ulanova T. et al. A new enzyme immunoassay for the detection of antibody to hepatitis E virus. J. Gastroenterol Hepatol. 2002, Suppl 3: 360-364.
- Resenchuk S.М., Blinov V.M. Alignment service: creation and processing of alignments of sequences of unlimited length. Comput. Appl. Biosci. (CABIOS). 1995, 11 (1): 7-11.
- Towbin H., Staehlin Т., Gordon Y. Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications. Proc. Natl. Acad. Sci. USA. 1979, 76 (9): 4350-4359.
- Yarbough P.O., Tam A.W., Fry K.E. et al. Hepatitis E virus: identification of type-common epitopes. J. Virol. 1991, 65 (11): 5790-5797.
- Yonglin Yang, Shaoli Lin, Yuchen Nan et al. A linear surface epitope in a proline-rich region of ORF3 product of genotype 1 hepatitis E virus. Viruses. 2016, Aug 18;8 (8): pii: E227.
- Zhou Y., Zhao C., Tian Y. et al. Characteristics and functions of HEVproteins. Adv. Exp. Med. Biol. 2016,948: 17-38.