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Features of the spread of a new coronavirus infection in the territory of municipalities of the Rostov region

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1. Title Title of document Features of the spread of a new coronavirus infection in the territory of municipalities of the Rostov region
2. Creator Author's name, affiliation, country Evgeniya G. Soboleva; Rostov-on-Don Research Anti-Plague Institute; Россия
2. Creator Author's name, affiliation, country Evgenij V. Kovalev; Department of the Federal Service for Supervision of Consumer Protection and Human Welfare in the Rostov Region; Россия
2. Creator Author's name, affiliation, country Sergej S. Slis’; Department of the Federal Service for Supervision of Consumer Protection and Human Welfare in the Rostov Region; Россия
2. Creator Author's name, affiliation, country Natalia L. Pichurina; Rostov-on-Don Research Anti-Plague Institute; Россия
2. Creator Author's name, affiliation, country Anna A. Kononenko; Rostov-on-Don Research Anti-Plague Institute; Россия
2. Creator Author's name, affiliation, country Elena N. Sokirkina; Rostov-on-Don Research Anti-Plague Institute; Россия
2. Creator Author's name, affiliation, country Alexey K. Noskov; Rostov-on-Don Research Anti-Plague Institute; Россия
3. Subject Discipline(s)
3. Subject Keyword(s) new coronavirus infection; COVID-19; importation; spread; morbidity; Rostov region
4. Description Abstract

Introduction. Since the registration of the first cases of COVID-19 in the PRC, due to the high migration activity of the population, the new coronavirus infection has spread throughout the world, including the Russian Federation.

Aim. To establish the features of the spread of a new coronavirus infection in the Rostov Region. Materials and methods.The analysis of 81 cases of the importation of a new coronavirus infection by persons who arrived in the Rostov Region from abroad or other regions of the Russian Federation was carried out based on the data of the Rostov Region office of the Federal Service for Supervision of Consumer Protection and Human Welfare. The dynamics of the spread of COVID-19 in the administrative territories of the Rostov Region has been analyzed. The data of viral genome-wide sequencing (n = 155) carried out in the Rostov-on-Don Research Anti-Plague Institute were used in this study.

Results. In the period from 03/21/2020 to 03/28/2020, cases imported both from abroad and from other regions of the Russian Federation were registered in the Rostov Region, , mainly on the territory of the Rostov urban agglomeration. The vector of the spread of the disease was directed from the administrative center of the region to the periphery. The emergence of a new genetic line B.617.2 (Delta) probably led to a significant increase in the incidence in the Rostov Region.

Conclusions. The spread of a new coronavirus infection in the Rostov Region was facilitated by the one of the main social factors of epidemiological risk, the population migration, which led to the importation of the infection to the administrative center of the subject, Rostov-on-Don city. Taking into account peculiarities of the Rostov region, the largest proportion of COVID-19 cases was recorded in the Rostov urban agglomeration. Against the background of the dominance of the “Delta” variant of the virus on the territory of the Rostov region, there was a tendency towards an increase in the number of cases.

5. Publisher Organizing agency, location Central Research Institute for Epidemiology
6. Contributor Sponsor(s)
7. Date (DD-MM-YYYY) 26.09.2022
8. Type Status & genre Peer-reviewed Article
8. Type Type Research Article
9. Format File format
10. Identifier Uniform Resource Identifier https://microbiol.crie.ru/jour/article/view/1309
10. Identifier Digital Object Identifier (DOI) 10.36233/0372-9311-195
11. Source Title; vol., no. (year) Journal of microbiology, epidemiology and immunobiology; Vol 99, No 4 (2022)
12. Language English=en ru
13. Relation Supp. Files Fig. 1. Imported and local cases of COVID-19 in Rostov Region in the periods: 21.03.2020 to 28.03.2020 (а), 29.03.2020 to 05.04.2020 (b), 06.04.2020 to 12.04.2020 (c), 13.04.2020 to18.04.2020 (d). (502KB)
Fig. 2. The number of imported аnd local cases of new coronavirus infection in Rostov Region. (52KB)
Fig. 3. The number of patients with COVID-19 in the municipalities of the Rostov Region during the period with the maximum number of patients — 09.01.2021 to 15.01.2021 (а) and as of the period of the preparation of the manuscript — 20.05.2021 to 26.05.2021 (b). (263KB)
Fig. 4. Municipal districts of the Rostov Region with confirmed cases of infection with genetic variants B.1.1.7 (а) and B.617.2 (b) COVID-19 in 2021. (384KB)
Fig. 5. The incidence of new coronavirus infection COVID-19 in the Rostov Region in 2020–2021.1 — the first case of isolation of "British" genetic variant of SARS-CoV-2;2 — the first case of isolation of "Indian" genetic variant of SARS-CoV-2. (65KB)
The number of imported cases into the territory of the Rostov Region in the period 03.05.2021–30.05.2021 (43KB)
14. Coverage Geo-spatial location, chronological period, research sample (gender, age, etc.)
15. Rights Copyright and permissions Copyright (c) 2022 Soboleva E.G., Kovalev E.V., Slis’ S.S., Pichurina N.L., Kononenko A.A., Sokirkina E.N., Noskov A.K.
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