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<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:ali="http://www.niso.org/schemas/ali/1.0/" article-type="other" dtd-version="1.2" xml:lang="en"><front><journal-meta><journal-id journal-id-type="publisher-id">Journal of microbiology, epidemiology and immunobiology</journal-id><journal-title-group><journal-title xml:lang="en">Journal of microbiology, epidemiology and immunobiology</journal-title><trans-title-group xml:lang="ru"><trans-title>Журнал микробиологии, эпидемиологии и иммунобиологии</trans-title></trans-title-group></journal-title-group><issn publication-format="print">0372-9311</issn><issn publication-format="electronic">2686-7613</issn><publisher><publisher-name xml:lang="en">Central Research Institute for Epidemiology</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="publisher-id">439</article-id><article-id pub-id-type="doi">10.36233/0372-9311-2019-4-98-105</article-id><article-categories><subj-group subj-group-type="toc-heading" xml:lang="en"><subject>REVIEWS</subject></subj-group><subj-group subj-group-type="toc-heading" xml:lang="ru"><subject>ОБЗОРЫ</subject></subj-group><subj-group subj-group-type="article-type"><subject></subject></subj-group></article-categories><title-group><article-title xml:lang="en">Genetic variability of <italic>Bordetella pertussis</italic> and its role in vaccine prevention of pertussis</article-title><trans-title-group xml:lang="ru"><trans-title>Генетическая изменчивость Bordetella pertussis и ее роль в вакцинопрофилактике коклюша</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Bazhanova</surname><given-names>I. G.</given-names></name><name xml:lang="ru"><surname>Бажанова</surname><given-names>И. Г.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>Moscow</p></bio><bio xml:lang="ru"><p>Бажанова Ирина Глебовна, к.б.н.</p><p>105064, Москва, М. Казенный пер., 5а, р.т. (495)916-22-63</p></bio><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Britsina</surname><given-names>M. V.</given-names></name><name xml:lang="ru"><surname>Брицина</surname><given-names>М. В.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>Moscow</p></bio><bio xml:lang="ru"><p>Москва</p></bio><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Mertsalova</surname><given-names>N. U.</given-names></name><name xml:lang="ru"><surname>Мерцалова</surname><given-names>Н. У.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>Moscow</p></bio><bio xml:lang="ru"><p>Москва</p></bio><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Ozeretskovskaya</surname><given-names>M. N.</given-names></name><name xml:lang="ru"><surname>Озерецковская</surname><given-names>М. Н.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>Moscow</p></bio><bio xml:lang="ru"><p>Москва</p></bio><xref ref-type="aff" rid="aff1"/></contrib></contrib-group><aff-alternatives id="aff1"><aff><institution xml:lang="en">Mechnikov Research Institute of Vaccines and Sera</institution></aff><aff><institution xml:lang="ru">НИИ вакцин и сывороток им. И.И.Мечникова</institution></aff></aff-alternatives><pub-date date-type="pub" iso-8601-date="2019-09-02" publication-format="electronic"><day>02</day><month>09</month><year>2019</year></pub-date><volume>96</volume><issue>4</issue><issue-title xml:lang="en"/><issue-title xml:lang="ru"/><fpage>98</fpage><lpage>105</lpage><history><date date-type="received" iso-8601-date="2019-09-02"><day>02</day><month>09</month><year>2019</year></date><date date-type="accepted" iso-8601-date="2019-09-02"><day>02</day><month>09</month><year>2019</year></date></history><permissions><copyright-statement xml:lang="en">Copyright ©; 2019, Bazhanova I.G., Britsina M.V., Mertsalova N.U., Ozeretskovskaya M.N.</copyright-statement><copyright-statement xml:lang="ru">Copyright ©; 2019, Бажанова И.Г., Брицина М.В., Мерцалова Н.У., Озерецковская М.Н.</copyright-statement><copyright-year>2019</copyright-year><copyright-holder xml:lang="en">Bazhanova I.G., Britsina M.V., Mertsalova N.U., Ozeretskovskaya M.N.</copyright-holder><copyright-holder xml:lang="ru">Бажанова И.Г., Брицина М.В., Мерцалова Н.У., Озерецковская М.Н.</copyright-holder><ali:free_to_read xmlns:ali="http://www.niso.org/schemas/ali/1.0/"/><license><ali:license_ref xmlns:ali="http://www.niso.org/schemas/ali/1.0/">https://creativecommons.org/licenses/by/4.0</ali:license_ref></license></permissions><self-uri xlink:href="https://microbiol.crie.ru/jour/article/view/439">https://microbiol.crie.ru/jour/article/view/439</self-uri><abstract xml:lang="en"><p>In many countries of the world despite the extensively vaccination against pertussis has increased the incidence of the whooping cough in all age group of the population. The MLST, MLVA and CGH investigations revealed the differences in genotypes between the vaccine strains <italic>B.pertussis </italic>and the circulating isolates <italic>B.pertussis </italic>in consequence of adaptation of the bacterium <italic>B.pertussis </italic>to the immunized hosts. It is lead to waning immynity and outbreak of incidence of pertussis. The mutations in the genes encoding the major virulence factors, the allelic polimorfism and decreasing the genome size of <italic>B.pertussis </italic>strains are the basis of the <italic>B.pertussis </italic>adaptation to the immunized hosts and dependent on the type of the vaccine used for immunization Programme. In countries that use acellular pertussis vaccine for vaccination programme the dominant isolates genotypes are: ptxА1-ptxС2- ptxР3-prn2- tcfA2-1-fim3-2 и ptxА1- ptxС2- ptxР3-prnА2- tcfA2- fim2-1- fim3-1, and that use the cellular pertussis vaccine the dominant isolates genotypes are ptxА1-ptxС1- ptxР1-prn1- tcfA2- fim2-2 fim3-1 и ptxА1- ptxС1- ptxР1- prn2- tcfA2- fim2-1- fim3-1. The constant monitoring of the genotypes of isolates <italic>B.pertussis </italic>is necessary to reveal the dominant genotypes and include them in the national immunization programme in combination with vaccine strains <italic>B.pertussis.</italic></p></abstract><trans-abstract xml:lang="ru"><p>Во многих странах мира, несмотря на высокий уровень вакцинации населения, увеличилось число вспышек коклюша во всех возрастных группах. MLST, MLVA и CGH исследования выявили несоответствие генотипов циркулирующих штаммов B.pertussis генотипам вакцинных штаммов, вследствие адаптации бактерий к вакцинированному хозяину, что привело к снижению иммунитета и возникновению вспышек заболевания коклюшем. Мутации в генах, кодирующих основные факторы вирулентности, аллельный полиморфизм и редукция генома в циркулирующих штаммах B.pertussis являются основой адаптации патогена к иммунизированной популяции и зависят от типа вакцин, используемых для иммунизации популяции. В странах, использующих бесклеточную коклюшную вакцину, доминируют в настоящее время изоляты, содержащие генотипы: ptxА1-ptxС2- ptxР3-prn2- tcfA2-1-fim3-2 и ptxА1- ptxС2- ptxР3- prnА2- tcfA2- fim2-1- fim3-1, а использующих корпускулярную вакцину, доминируют изоляты генотипов ptxА1-ptxС1- ptxР1-prn1- tcfA2- fim2-2 fim3-1 и ptxА1- ptxС1- ptxР1- prn2- tcfA2- fim2-1- fim3-1. Необходимо проведение постоянного мониторинга генотипов циркулирующих штаммов B.pertussis для своевременного выявления доминирующего генотипа и его использования в иммунизационной программе в сочетании с вакцинными штаммами B.pertussis.</p></trans-abstract><kwd-group xml:lang="en"><kwd>pertussis</kwd><kwd><italic>B. pertussis</italic> vaccine strains</kwd><kwd><italic>B. pertussis</italic> circulating strains</kwd><kwd>isolate</kwd><kwd>dominant genotypes</kwd><kwd>genes</kwd></kwd-group><kwd-group xml:lang="ru"><kwd>коклюш</kwd><kwd>вакцинные штаммы B.pertussis</kwd><kwd>циркулирующие штаммы B.pertussis</kwd><kwd>изоляты</kwd><kwd>доминирующие генотипы</kwd><kwd>гены</kwd></kwd-group><funding-group/></article-meta></front><body></body><back><ref-list><ref id="B1"><label>1.</label><mixed-citation>1. Борисова О.Ю., Гадуа Н.Т., Пименова А.С., Петрова М.С., Попова О.П., Алешкин В.А., Кафарская Л.И., Донских Е.Е., Юсуф Е.В., Остапенко Н.А., Москвина Т.И., Щербакова Т.А. 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